Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015879780.1_cds_XP_016437285.1_33057
CDS Infomation

[gene=LOC107763320] [db_xref=GeneID:107763320] [protein=ATP-dependent RNA helicase-like protein DB10] [protein_id=XP_016437285.1] [location=join(7755..8078,8438..8527,9061..9411,9605..9882,10489..10863,10947..11406)] [gbkey=CDS]
Sequence

ATGGCTGCTACTGCAACTGCATCTTCTGCTGGTCCGCGTTACGCACCAGAGGACCCCACC
CTCCCAAAACCTTGGAAAGGCCTGGTTGATGGTAAGACTGGATACCTCTATTTTTGGAAT
CCAGAGACCAATGTTACCCAATATGAGAGGCCTGTTGCTCCTTCCCATGGGGGTACTGCT
CCACAACATAAATCATCGGTATCTGTAAGTTCATCAGTTCAAAGGCCTTCTCAAGGTCAA
CCTCCTGACCGTGATGATGACAATGAATACAACAGAGGTAGCAATGGTGGCTGGAGCAAG
CTTTCTTCTGGTGAGGATATTAAGACTGCAAGAGGAAGTGAGCTTTCCCGCGATGAAACA
TCTGTACCTAAAAGCAATAGTGCTCCAGCTGCTGCTAGTAACATATCTCCNTACTGTCTA
TATGGAGGCGCCCCAAAAGGCCCTCAGCTACGAGATCTGGATAGGGGAGTAGATATTGTT
GTCGCTACCCCTGGTCGTTTGAATGATATTTTGGAGATGAGAAGAATTAGGCTGGATCAA
ATTTCTTACTTGGTGTTAGATGAAGCGGATCGTATGCTGGACATGGGATTTGAACCTCAG
ATAAGGAAGATTGTAAAAGAGGTGCCAACACGACGGCAGACACTGATGTTCACGGCGACA
TGGCCAAAGGAGGTCCGTAAAATTGCAGCTGATCTATTGGTTAATCCAGTTCAGGTTAAC
ATTGGGAATGTTGACGAACTTGTTGCAAACAAGTCTATAACACAGTACGTTGAAGTCTTG
TCATATATGGAGAAACAAAGGCGGCTAGACCAGATCTTGAGATCCCAAGAACCAGGATCA
AAAATCATAATCTTCTGTGCAACAAAGAAAATGTGTGACCAACTTGCTCGCAATCTTACA
CGCCCATTTGGAGCTGCTGCAATTCATGGTGATAAATCTCAGGGTGAGAGGGATCATGTA
TTGAGCCAGTTCCGCACGGGTAAATCCCCCGTTCTTGTCGCTACAGATGTTGCTGCCCGG
GGCTTGGATGTCAAAGATATCAGGGTGGTGATCAACTTTGACTTTCCTACCGGAGTAGAG
GATTATGTACACAGAATAGGAAGAACTGGTCGGGCTGGTGCGACTGGTGAGGCCTACACA
TTTTTTTGTGACCAGGATGCTAAGCATGCTTCAGATCTTATTAAAATTTTAGAAGGAGCA
AATCAGCAAGTGCCTACTGAACTACGTGATATGGCTTCTCGAGGTGGTGGTATGGGAGGG
GCTAGGCGTCAATGGAGTTCTGGCCCAGGTGGACGTGAAGGAGGACGTGGGGGACGTTAT
GATTCCGGCTATGGTGGAAGAGATGGAGGAAGGGGTGGTTGGGGAGCACCATCATCGGAA
AGAAGTGGACGTGATTATGAGTCGGATTCACGTGACAGTGATAGATATGGTCATGGCTCT
CGTGATACCGACGCTCCACCGAGCTTCCACGCTCGTAGCTTCCATGAAACAATGATGCAG
GCTTCACAGAGACGTGGTCGAAGTCGGAGCAGAAGCCCGAATAAAGGTTCAGGATGGGGT
GATACAAAAAGCAGGGAACGCAGTCGCAGCCGTAGTGCTGAAAGATTTGATCAGGCTCCT
CGTCAAGCCCCAGTGGGACGCAGTTTTCATGAAAGCATGATGGGGCGCAGTGGATCATCC
CCAGTGGCCTCAAAACACCGATCACCCTCTTACTCTGATAATCGATCTCCATCAGCTGGT
GATTGCCAAAAGGGCTGGGAAAAAGAAAAATCTCCACCTAGATGGCAAGGTGATGGGAAA
TTTGGCAATGAACCTCGTGCTTACAATGGGGAGGAGGAAGAAGGTATGATTCCTGAAGAC
GTCGAAACAAGGGCCTAA

Peptide Sequence

PEP ID

XP_016437285.1
PEP Infomation

PREDICTED: ATP-dependent RNA helicase-like protein DB10 [Nicotiana tabacum]
Sequence

MAATATASSAGPRYAPEDPTLPKPWKGLVDGKTGYLYFWNPETNVTQYERPVAPSHGGTA
PQHKSSVSVSSSVQRPSQGQPPDRDDDNEYNRGSNGGWSKLSSGEDIKTARGSELSRDET
SVPKSNSAPAAASNISPYCLYGGAPKGPQLRDLDRGVDIVVATPGRLNDILEMRRIRLDQ
ISYLVLDEADRMLDMGFEPQIRKIVKEVPTRRQTLMFTATWPKEVRKIAADLLVNPVQVN
IGNVDELVANKSITQYVEVLSYMEKQRRLDQILRSQEPGSKIIIFCATKKMCDQLARNLT
RPFGAAAIHGDKSQGERDHVLSQFRTGKSPVLVATDVAARGLDVKDIRVVINFDFPTGVE
DYVHRIGRTGRAGATGEAYTFFCDQDAKHASDLIKILEGANQQVPTELRDMASRGGGMGG
ARRQWSSGPGGREGGRGGRYDSGYGGRDGGRGGWGAPSSERSGRDYESDSRDSDRYGHGS
RDTDAPPSFHARSFHETMMQASQRRGRSRSRSPNKGSGWGDTKSRERSRSRSAERFDQAP
RQAPVGRSFHESMMGRSGSSPVASKHRSPSYSDNRSPSAGDCQKGWEKEKSPPRWQGDGK
FGNEPRAYNGEEEEGMIPEDVETRA

Transcript Sequence

Gene sequence data has not been registered.